CDS

Accession Number TCMCG017C12121
gbkey CDS
Protein Id OMO98408.1
Location join(98621..98831,98927..99286,99413..99469,99933..102337,102423..102692,102777..102857,103135..103246,103333..103399,103645..103738)
GeneID InterPro:IPR001357
Organism Corchorus olitorius
locus_tag COLO4_13950

Protein

Length 1218aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01015340.1
Definition hypothetical protein COLO4_13950 [Corchorus olitorius]
Locus_tag COLO4_13950

EGGNOG-MAPPER Annotation

COG_category DKLT
Description BRCT domain-containing DNA repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K20780        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000414        [VIEW IN EMBL-EBI]
GO:0000416        [VIEW IN EMBL-EBI]
GO:0000726        [VIEW IN EMBL-EBI]
GO:0002637        [VIEW IN EMBL-EBI]
GO:0002639        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0002694        [VIEW IN EMBL-EBI]
GO:0002696        [VIEW IN EMBL-EBI]
GO:0002697        [VIEW IN EMBL-EBI]
GO:0002699        [VIEW IN EMBL-EBI]
GO:0002700        [VIEW IN EMBL-EBI]
GO:0002702        [VIEW IN EMBL-EBI]
GO:0002703        [VIEW IN EMBL-EBI]
GO:0002705        [VIEW IN EMBL-EBI]
GO:0002706        [VIEW IN EMBL-EBI]
GO:0002708        [VIEW IN EMBL-EBI]
GO:0002712        [VIEW IN EMBL-EBI]
GO:0002714        [VIEW IN EMBL-EBI]
GO:0002819        [VIEW IN EMBL-EBI]
GO:0002821        [VIEW IN EMBL-EBI]
GO:0002822        [VIEW IN EMBL-EBI]
GO:0002824        [VIEW IN EMBL-EBI]
GO:0002889        [VIEW IN EMBL-EBI]
GO:0002891        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030330        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031062        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031334        [VIEW IN EMBL-EBI]
GO:0031396        [VIEW IN EMBL-EBI]
GO:0031398        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034708        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0035066        [VIEW IN EMBL-EBI]
GO:0035097        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044666        [VIEW IN EMBL-EBI]
GO:0045191        [VIEW IN EMBL-EBI]
GO:0045830        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045911        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050864        [VIEW IN EMBL-EBI]
GO:0050865        [VIEW IN EMBL-EBI]
GO:0050867        [VIEW IN EMBL-EBI]
GO:0050871        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051249        [VIEW IN EMBL-EBI]
GO:0051251        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051568        [VIEW IN EMBL-EBI]
GO:0051569        [VIEW IN EMBL-EBI]
GO:0051571        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060260        [VIEW IN EMBL-EBI]
GO:0060261        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1901985        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903320        [VIEW IN EMBL-EBI]
GO:1903322        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000142        [VIEW IN EMBL-EBI]
GO:2000144        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2000758        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTTCTCTTGGAGACGACAAGGGCGAAATTAACCATTTTGAGAAGAATTCGAGCGCCGATGCCGAGACTCAGCCTCTTGACTTTGATTCTGAGTTTTCCTTTTCTGTTTTTGGCGAAAGTAAATTTTCTGAGAAGAATCCAAACACTGATGCCGAGACTCAGCCACTTGACTTTGATTCTCAGTTTTTCTTTCCTGTTTTGTCCTCCGGTGACATAGCTGATAAGGAGGATGGAGATGGATTAGAGTATCTACAGAGTACGGTTCCTTTGGATGATCATGATGTTGGTGTCGATGATGAATTGGAGACCCAAGCTGTGAACTTTGATGGCGAAACTCAAGTGTTGAATCTTGGCGGTGAAACCCAGGTGTTGGATGATTTTATGGAGACGCAGTTGTTGGATGAATTTGATGACGAAGTTGTTCTTGATAGTGATGGTGAAGGAACAGACCAAACTGAGGTTTTGAATGACACTGATGAAGGAGATTGCGCGCAATCCACGCGTGAGGAGGAAAAGAAGGAGTCTTTGGAGCAATGTAATGCTTCTGCTGATGAACAAAAGAGTTCAGGAATTCATGCTCCAACAACAACAAAAGATGTTGAAGCTTTGCCAGAATTGAAACCTAGATCTGTGCGAAGGTTTACTACAGTTCGTGCAGCATCCTTGCGGGCCTCTGGTCTTGCTGCTCGCAATGCAGCACTACGTGAAATAAACAGCAACTCTTGTTCTATCCGGACTGATAGTGAGTTTTCAGACCAGTTCACAGTCAATAGTAGTGGTTTGAATTCTGAAGTTGCAGAGAAGATTAATCAGGCACATGATCGGGGGAATTATGATGAGAAGTCAATTGGTTGCAGGGTTGATAGCTCAACTGCAAGAAAACTTTTTTCTGATGATTCTCTTGGCGAAAATCAAGGAATTTCATGCAGCAATGAAAATGCAGATGGAAGAGAAGACTTGCTTCAGTCTCCTGACTATGATGGTCCATCGGCAGGTTTAAGCTATGTAGACTCTCAAGAACCTGGGGAGTTGTCACAAGCTAATGCTCTTAATTTTGTGGAAAGATTTGTGAATGAAAATTTGGTGGAGCTTGATGGTGAAATCCCTCTCAGAAAGAGTACTCGGGAGGAATCAAAACTTATTTCTAGTGCAAAAGGGCCACAAAGTTTGGCCAAGAAAACTATTGAAAGAAGCACAGCTAATGAAACAGGGATTTTTGAATGGGATGACCTTCTGGAGGATGAAGGAGGGGGTGATATATACTGTAGAAGGAAGGAAGAATTTTATGGTAGTGGAATCCGTGCACGGAAGTCTGCTACGCATCCCCAGAAGCGTAAAGTAAGGAAATTGGATGCCTCTTACAATGAAGACCAACCAAATGCCCATTATAAAAAGATATTTCATTCTGATTCAAAGTTATTGTTGGGCAAGTCAAAAGATAATGGCAAGACAGTACAAGGTAGTGAAATGAATTTTAGAAAGAATCTTTTCAATGAGTTTGATGAACAGTTTAACCCCGAATCTTCAGGGGGACAATTGGAAGCCACTGCTGCACAGACAGGTATTCCTGAAGTAGTAAATGTAGGTCTTGACACTCAGATGGCTGCTGAAGCTATGGAAGCTTTATTCTATGGGGAGGGGGCTACTGACCAGAATGCTAATCAAGGTGTCCAAAGCATATCTAAGGATTCCTCCAAAGGTTCACTTAAAGGAAAATCTAGGAAGAAAGTTTTTTCTGAAGAGCCTACATTGCGAAGGGTTGTTCACTTTTCTGATGCGGCTCCTGTTACACGAGGATCCAAGAAAACTAAGTCAAGTACAGAATCTTCACTTTTGCAGGACAGACGTTCCAAGAATGTCAGGAGGGAGTGTGATACAGAGCTGCATCTGTCAAAACTGAAGAAAGCTAAGTCAAGAACCGACAAGCATCAAGTTGCGGGTGGCATTGATATGTACAAAACGCCACCTAAGAGCAACCAAAGAAAGGCAGGTGGGACTTTGGAGAGGAGTCAACTTCATGGCACTAGAAAATCAGCCAGGGGCATGAAGAAACAGCATCCTGAGGAGGTTCATAGTTCTATACCTGTTGCTCATCGCACAAGGAGGTCCTTGCTCATGAATATGCAAACAGCTGAGACACCTGCCAGTGATTGTGGAGAAGGTAGAAAACATAAAAAAGACATTGGTTTCCATGAAAAAAGTAGATCCACGAGTACTGAAGTTATGTTATCTGCAGTGTCAAATGCTAAAGGGAAACTTCCTAAGTTGGGTTCCAAACAATCTGGAGAAAATGACAATGTCAAATCAAGTAATAATGACCAATTGCATTTGGAGTTGATTGCTGAGAGTAATGTGAATCATGTATTGAGCTATCCCAAACAAAGAAGATCTTGTCGGAGAATGTCTACTGATGTTGGTGAATCTGATAAAGGGGAAGCACAGCCCAGAGTATCTGTTGAGGAGGAAAACGATGGACAATCCGTTGCTGTGCTCAAAAGGTCCAGAAGCAGCAGTAGAAACTCTCACAAACATTTAAACATTAAGAGGATAAAACGGTCATCTGAAAATACTTGTCCAGTTATGTATTCTGCAGACCAGAATTCAGAAGGGGAATTGTCTCATCAAAGTTCAGATAAAAGTCGTTCAGGGGTTGATGTTCTTGAGCACTCTGAAGGAAACTGTGATGCAGTTCCGTTACCAGTTGCAGAAAGCTCAGCTGTGAATGCCACTTTAGATAAATCGCCTAAAGAGAAATCTAAATCACCTGGTTCTGTATGCAATACCCCAGTTAATTGTCCGACACCTATCAATGATGCCTCACCTATTTGCATGGGTGAAGAATACTTCAAACAATCATGCAAGAAGAACCTATCAAGAACTTCACTTATCAAGGAGCTCAGAAGTTTAAGCCCCATCGAGCATGAGCCCATTTCTCCTTTGAAAGATTTGAGGAAGAGAAGGGATTTGGCCAATGTCAGAGTCCTGTTTAGTAACCACCTCGATGAGGATATAGTTAAACAGCAGAAAAAGATCTTGGTTCGCCTAGGAATCTCTGAGGTGTCATCAATTTTAGATGCAACACACTTCATAACTGATAAATTTGTGCGTACTAGGAATATGTTGGAAGCAATTGCTTCTGGCAAACCGATTGTCACACATTTATGGCTTGAAAGCATTGGACAGGTTAACATTCACATTGATGAAGAAGCTTACATATTGAGAGACATTAAAAAAGAGAAAGAGCTTGGCTTTTGCATGCCAGTTTCTTTAGCACGTGCACGCAAGCGACCCTTATTACAGGGTCGAAGAGTTTTAGTTACCCCAAATACGAAGCCAGGGAAAGATACAATCTCGCATCTGGTTACTGCAGTTGGTGGTCAGGCAGTGGAGAGAATTGGCAGATCTGCTACGAAGGACGACAAAGTCCCAGACGATTTGTTGGTTCTATCATGTGAAGAAGATTATGCAATTTGTGTTTCTTTCCTTGAAAAAGGCGCAGCGGTTTATAGCTCGGAGCTGCTACTGAATGGAATAGTTACTCAGAAGCTGGAATATGAGAGGCATAGACTCTTTGCAGATAATGTTAAACGAACACGCTCTACCTTATGGCTGAGGAAGGATAATAAATTCCACCCCATCACAAAGCCTAAATAA
Protein:  
MGSLGDDKGEINHFEKNSSADAETQPLDFDSEFSFSVFGESKFSEKNPNTDAETQPLDFDSQFFFPVLSSGDIADKEDGDGLEYLQSTVPLDDHDVGVDDELETQAVNFDGETQVLNLGGETQVLDDFMETQLLDEFDDEVVLDSDGEGTDQTEVLNDTDEGDCAQSTREEEKKESLEQCNASADEQKSSGIHAPTTTKDVEALPELKPRSVRRFTTVRAASLRASGLAARNAALREINSNSCSIRTDSEFSDQFTVNSSGLNSEVAEKINQAHDRGNYDEKSIGCRVDSSTARKLFSDDSLGENQGISCSNENADGREDLLQSPDYDGPSAGLSYVDSQEPGELSQANALNFVERFVNENLVELDGEIPLRKSTREESKLISSAKGPQSLAKKTIERSTANETGIFEWDDLLEDEGGGDIYCRRKEEFYGSGIRARKSATHPQKRKVRKLDASYNEDQPNAHYKKIFHSDSKLLLGKSKDNGKTVQGSEMNFRKNLFNEFDEQFNPESSGGQLEATAAQTGIPEVVNVGLDTQMAAEAMEALFYGEGATDQNANQGVQSISKDSSKGSLKGKSRKKVFSEEPTLRRVVHFSDAAPVTRGSKKTKSSTESSLLQDRRSKNVRRECDTELHLSKLKKAKSRTDKHQVAGGIDMYKTPPKSNQRKAGGTLERSQLHGTRKSARGMKKQHPEEVHSSIPVAHRTRRSLLMNMQTAETPASDCGEGRKHKKDIGFHEKSRSTSTEVMLSAVSNAKGKLPKLGSKQSGENDNVKSSNNDQLHLELIAESNVNHVLSYPKQRRSCRRMSTDVGESDKGEAQPRVSVEEENDGQSVAVLKRSRSSSRNSHKHLNIKRIKRSSENTCPVMYSADQNSEGELSHQSSDKSRSGVDVLEHSEGNCDAVPLPVAESSAVNATLDKSPKEKSKSPGSVCNTPVNCPTPINDASPICMGEEYFKQSCKKNLSRTSLIKELRSLSPIEHEPISPLKDLRKRRDLANVRVLFSNHLDEDIVKQQKKILVRLGISEVSSILDATHFITDKFVRTRNMLEAIASGKPIVTHLWLESIGQVNIHIDEEAYILRDIKKEKELGFCMPVSLARARKRPLLQGRRVLVTPNTKPGKDTISHLVTAVGGQAVERIGRSATKDDKVPDDLLVLSCEEDYAICVSFLEKGAAVYSSELLLNGIVTQKLEYERHRLFADNVKRTRSTLWLRKDNKFHPITKPK